STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1242Lactoylglutathione lyase-like lyase; IMG reference gene:2512956286. (137 aa)    
Predicted Functional Partners:
RSP_1243
Transcriptional regulator, LacI family; IMG reference gene:2512956287; PFAM: Bacterial regulatory proteins, lacI family; family.
  
    0.800
mgtE
Mg/Co/Ni transporter, MgtE; Acts as a magnesium transporter.
  
    0.564
RSP_1245
Putative oxidoreductase, Gfo/Idh/MocA family; IMG reference gene:2512956289; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
  
    0.551
RSP_1244
Putative IolE, Sugar phosphate isomerase/epimerase; IMG reference gene:2512956288; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel.
  
    0.528
RSP_1247
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; IMG reference gene:2512956290; PFAM: ABC transporter.
  
    0.527
nuoCD
NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
  
 0.523
RSP_6150
Monosaccharide ABC transporter membrane protein, CUT2 family; IMG reference gene:2512956291; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.523
nuoI1
NADH-quinone oxidoreductase, chain I, ferredoxin; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.520
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.520
RSP_1249
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; IMG reference gene:2512956292; PFAM: family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
    0.491
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.