STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1334Putative chemotactic signal-response protein CheL; IMG reference gene:2512956380; PFAM: Rod binding protein. (92 aa)    
Predicted Functional Partners:
RSP_1331
IMG reference gene:2512956377; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB.
 
 
 0.976
flgE1
Putative flagellar hook protein; IMG reference gene:2512956349; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins.
 
  
 0.972
RSP_1313
Putative flagellar synthesis protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.971
RSP_1323
Hypothetical protein; IMG reference gene:2512956369; extended by 76 aa.
  
    0.969
RSP_2220
Putative flagellar motor switch protein (fliG); IMG reference gene:2512954148; PFAM: FliG C-terminal domain.
 
  
 0.967
RSP_1335
IMG reference gene:2512956382; PFAM: Flagellar hook-length control protein FliK; truncated by 637 aa.
 
  
 0.966
RSP_1330
Putative flagellar basal-body rod protein FlgC; IMG reference gene:2512956376; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgB; Belongs to the flagella basal body rod proteins family.
 
  
 0.962
RSP_1336
Putative FlgD protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.961
fliE1
IMG reference gene:2512956375; PFAM: Flagellar hook-basal body complex protein FliE.
 
  
 0.958
RSP_1314
Hypothetical protein; IMG reference gene:2512956360; extended by 8 aa.
  
    0.957
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.