STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1370IMG reference gene:2512956418; PFAM: Alpha amylase, catalytic domain. (536 aa)    
Predicted Functional Partners:
RSP_2446
Trehalose synthase; IMG reference gene:2512954390; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase; trehalose synthase-fused probable maltokinase.
 
0.979
RSP_2451
IMG reference gene:2512954394; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
  
 
 0.940
RSP_2874
Putative Beta-glucosidase A; IMG reference gene:2512954836; PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase.
 
 
 0.938
RSP_2257
Putative Fructokinase; IMG reference gene:2512954186; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
   
 0.917
aglG
IMG reference gene:2512954833; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.803
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.701
aglF
IMG reference gene:2512954834; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.600
aglE
Sucrose-binding protein;trehalose-binding protein;maltose-binding protein; IMG reference gene:2512954835; PFAM: Bacterial extracellular solute-binding protein.
 
  
 0.585
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.583
RSP_2450
Maltooligosyl trehalose hydrolase; IMG reference gene:2512954393; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase.
 
  
0.550
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.