STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1372IMG reference gene:2512956419; PFAM: Major Facilitator Superfamily. (412 aa)    
Predicted Functional Partners:
RSP_1373
IMG reference gene:2512956420; PFAM: Major Facilitator Superfamily.
 
   
 0.627
RSP_0758
Riboflavin synthase alpha chain; IMG reference gene:2512955788; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit.
   
    0.577
lpsB
Putative lipopolysaccharide core biosynthesis mannosyltransferase protein; IMG reference gene:2512956421; PFAM: Glycosyl transferases group 1.
  
    0.572
RSP_0900
IMG reference gene:2512955932; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.504
RSP_6050
Hypothetical protein; IMG reference gene:2512954327.
  
  
 0.500
msrP
Sulfite oxidase-like oxidoreductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce bo [...]
 
  
 0.495
RSP_2201
IMG reference gene:2512954129; PFAM: MerR family regulatory protein; MerR, DNA binding.
   
  
 0.479
RSP_0169
Na+/solute symporter; IMG reference gene:2512955167; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
  
 0.463
mogA
IMG reference gene:2512953731; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain.
  
  
 0.461
stcD2
Putative NADH-dependent oxidase; IMG reference gene:2512957216; PFAM: HI0933-like protein; NADH:flavin oxidoreductase / NADH oxidase family; frameshift in old version eliminated, translation corrected; truncated by 10 aa.
  
  
 0.448
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.