STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1423ParA family ATPase; IMG reference gene:2512957358; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (468 aa)    
Predicted Functional Partners:
RSP_1422
ParB-like nuclease; IMG reference gene:2512957357; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins.
 
 0.997
RSP_1056
Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
      
 0.814
RSP_0809
Nitroreductase; IMG reference gene:2512955837; PFAM: Nitroreductase family.
  
  
 0.813
RSP_3218
5,6-dimethylbenzimidazole synthase; IMG reference gene:2512956729; PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.813
RSP_1425
IMG reference gene:2512957359; PFAM: Initiator Replication protein.
 
    0.806
spo0J
Chromosome segregation DNA-binding protein; IMG reference gene:2512956270; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; truncated by 5 aa; Belongs to the ParB family.
 
 0.762
ftsZ1
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.757
parB
ParB-like nuclease; IMG reference gene:2512956472; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein; TIGRFAM: ParB-like partition proteins.
  
 
 0.679
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
  
 0.666
RSP_3609
ParB-like nuclease; IMG reference gene:2512957124; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins.
 
 
 0.643
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.