STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1523IMG reference gene:2512953418; PFAM: Phosphotransferase enzyme family. (341 aa)    
Predicted Functional Partners:
RSP_1524
Nucleotidyltransferase family protein; IMG reference gene:2512953419.
 
 0.999
RSP_1522
ATPase, YjeE family; IMG reference gene:2512953417; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; extended by 8 aa.
 
    0.984
RSP_2941
Putative Glycoside hydrolase; IMG reference gene:2512954906; PFAM: Glycosyl hydrolase family 3 N terminal domain.
 
 
 0.956
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
    
 0.926
RSP_1405
N-acetylglucosamine kinase; IMG reference gene:2512956453; PFAM: ROK family.
   
 
  0.900
RSP_1525
Putative Helicase/Exonuclease; IMG reference gene:2512953420; TIGRFAM: double-strand break repair protein AddB, alphaproteobacterial type.
  
    0.855
RSP_1527
DNA helicase/exodeoxyribonuclease V, subunit A; IMG reference gene:2512953421; PFAM: UvrD/REP helicase; TIGRFAM: double-strand break repair helicase AddA, alphaproteobacterial type; Belongs to the helicase family. UvrD subfamily.
  
    0.783
gph
Phosphoglycolate phosphatase; IMG reference gene:2512954449; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; 2-phosphoglycolate phosphatase, prokaryotic.
 
  
 0.695
trxA
Thioredoxin; IMG reference gene:2512953422; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
       0.681
RSP_1521
Hypothetical protein; IMG reference gene:2512953416.
 
    0.660
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.