STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1553Putative glyoxylate induced protein; IMG reference gene:2512953449; PFAM: Cupin domain; TIGRFAM: putative allantoin catabolism protein. (278 aa)    
Predicted Functional Partners:
RSP_1552
Ureidoglycolate hydrolase; IMG reference gene:2512953448; PFAM: Ureidoglycolate hydrolase.
 
 
  0.990
RSP_1554
Putative polysaccharide deacetylase; IMG reference gene:2512953450; PFAM: OHCU decarboxylase; Polysaccharide deacetylase; TIGRFAM: OHCU decarboxylase; putative urate catabolism protein.
 
    0.897
RSP_1555
Transthyretin-like protein; IMG reference gene:2512953451; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.785
RSP_3583
IMG reference gene:2512957096; PFAM: Cytochrome c; Protein of unknown function (DUF989).
 
    0.562
RSP_3323
Putative flavoprotein containing monooxygenase involved in K+ transport; IMG reference gene:2512956831; PFAM: Flavin-binding monooxygenase-like.
 
    0.459
RSP_0469
Putative dehydrogenase; IMG reference gene:2512955480; PFAM: FAD dependent oxidoreductase.
   
    0.457
sndh
Putative L-sorbosone dehydrogenase; IMG reference gene:2512956573; PFAM: Membrane bound L-sorbosone dehydrogenase.
   
    0.457
RSP_0198
Phosphatidylglycerophosphate synthase; IMG reference gene:2512955195; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
    0.437
xdhA
Xanthine dehydrogenase, small subunit; IMG reference gene:2512957064; PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: xanthine dehydrogenase, small subunit.
 
    0.429
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.