STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1627Putative N-6 adenine-specific DNA methylase; IMG reference gene:2512953527; PFAM: D12 class N6 adenine-specific DNA methyltransferase. (268 aa)    
Predicted Functional Partners:
RSP_1626
Hypothetical protein; IMG reference gene:2512953526.
  
    0.636
RSP_1625
Hypothetical protein; IMG reference gene:2512953525.
  
    0.599
RSP_2930
Hypothetical protein; IMG reference gene:2512954892.
   
    0.577
RSP_0517
Hypothetical protein; IMG reference gene:2512955529.
   
    0.457
fliF
Putative flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
    0.457
RSP_3486
Putative outer membrane protein, OmpA family; IMG reference gene:2512956996; PFAM: OmpA family; Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein.
   
    0.457
RSP_3627
IMG reference gene:2512957161; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.
 
   0.454
RSP_1622
Putative DNA-binding protein; IMG reference gene:2512953523; PFAM: Helix-turn-helix; Domain of unknown function (DUF955).
 
     0.450
gpD
Phage tail protein D; IMG reference gene:2512956868; PFAM: Phage late control gene D protein (GPD).
 
    0.447
RSP_0413
IMG reference gene:2512955426; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
   
    0.437
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.