STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1638Hypothetical protein; IMG reference gene:2512953537. (124 aa)    
Predicted Functional Partners:
RSP_1639
Hypothetical protein; IMG reference gene:2512953538.
  
    0.789
RSP_1644
Hypothetical protein; IMG reference gene:2512953544.
  
    0.786
RSP_1640
Phage protein, HK97 gp10 family; IMG reference gene:2512953541; PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family.
  
    0.781
RSP_1641
Bacteriophage head-tail adaptor; IMG reference gene:2512953542; PFAM: Phage head-tail joining protein.
  
    0.781
RSP_1643
Hypothetical protein; IMG reference gene:2512953543.
  
    0.779
RSP_6012
IMG reference gene:2512953539; PFAM: Protein of unknown function (DUF3168).
       0.778
RSP_6013
Hypothetical protein; IMG reference gene:2512953540.
       0.773
RSP_1637
Hypothetical protein; IMG reference gene:2512953536.
  
    0.589
RSP_1645
Putative phage-related protein; IMG reference gene:2512953545; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
  
    0.498
RSP_1635
Hypothetical protein; IMG reference gene:2512953534.
  
    0.449
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.