STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBCamphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (124 aa)    
Predicted Functional Partners:
RSP_1745
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
  
 0.875
RSP_1746
Chaperone required for the assembly of F1-ATPase; IMG reference gene:2512953650; PFAM: ATP12 chaperone protein.
  
    0.844
RSP_1743
Recombination protein MgsA; IMG reference gene:2512953647; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA).
  
    0.774
RSP_1742
Serine protease, trypsin family; IMG reference gene:2512953646; PFAM: Trypsin; TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.
  
    0.633
bztA
General L-amino acid transport system substrate-binding protein; IMG reference gene:2512953651; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein.
       0.614
RSP_1741
Putative LuxR family protein; IMG reference gene:2512953645; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain.
  
    0.508
rplQ
LSU ribosomal protein L17P; IMG reference gene:2512953644; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17.
     
 0.504
bztB
General L-amino acid transport system permease protein; IMG reference gene:2512953652; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
  
    0.440
bztC
General L-amino acid transport system permease protein; IMG reference gene:2512953653; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
  
    0.431
pncA
Putative pyrazinamidase/nicotinamidase; IMG reference gene:2512956415; PFAM: Isochorismatase family.
  
    0.419
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.