STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1791IMG reference gene:2512953698; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. (740 aa)    
Predicted Functional Partners:
RSP_1790
Putative transcriptional regulator; IMG reference gene:2512953697; PFAM: MerR family regulatory protein; MerR, DNA binding.
 
  
 0.838
RSP_2890
Copper-translocating P-type ATPase; IMG reference gene:2512954852; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
 
0.828
RSP_2891
Putative copper chaperone; IMG reference gene:2512954853; PFAM: Heavy-metal-associated domain.
  
 
 0.803
RSP_1789
Hypothetical protein; IMG reference gene:2512953696; PFAM: Uncharacterised BCR, YnfA/UPF0060 family.
 
     0.661
RSP_0393
Putative riboflavin biosynthesis protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.458
RSP_2727
Putative 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; IMG reference gene:2512954672; PFAM: HhH-GPD superfamily base excision DNA repair protein.
  
 
 0.449
RSP_2889
Transcriptional regulator; IMG reference gene:2512954851; PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Cu(I)-responsive transcriptional regulator.
  
 0.445
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.