STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sodCPutative Copper/Zinc superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (185 aa)    
Predicted Functional Partners:
RSP_2890
Copper-translocating P-type ATPase; IMG reference gene:2512954852; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
 0.970
RSP_2891
Putative copper chaperone; IMG reference gene:2512954853; PFAM: Heavy-metal-associated domain.
   
 0.957
RSP_2693
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.882
fbcB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.864
fbcF
Ubiquinol-cytochrome C reductase, iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.828
RSP_2389
IMG reference gene:2512954334; PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.822
pfpI
IMG reference gene:2512954513; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family.
  
 
 0.821
ccmG
Putative thiol-disulfide interchange protein; IMG reference gene:2512953711; PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily.
  
 0.811
RSP_2017
Hypothetical protein; IMG reference gene:2512953934; PFAM: Protein of unknown function (DUF461).
    
   0.811
RSP_0725
Thioredoxin, thioldisulfide interchange protein; IMG reference gene:2512955748; PFAM: AhpC/TSA family.
   
 0.772
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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