STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1840Hypothetical protein; IMG reference gene:2512953749. (254 aa)    
Predicted Functional Partners:
RSP_2972
Hypothetical protein; IMG reference gene:2512954938.
  
     0.671
RSP_1839
IMG reference gene:2512953748; PFAM: Acetyltransferase (GNAT) family.
       0.621
RSP_0915
Hypothetical protein; IMG reference gene:2512955947; PFAM: Uncharacterized protein conserved in bacteria (DUF2125).
  
     0.530
RSP_1838
Conserved protein of DIM6/NTAB family; IMG reference gene:2512953747; PFAM: Flavin reductase like domain.
       0.515
RSP_1809
Putative membrane protein; IMG reference gene:2512953716; PFAM: Rhomboid family; extended by 114 aa; old pseudo, frameshift corrected.
  
     0.497
trgA
Tellurite resistance protein; IMG reference gene:2512954069.
  
     0.483
RSP_0421
Bacterial lipocalin; IMG reference gene:2512955434; PFAM: Lipocalin-like domain.
  
     0.477
RSP_1844
Hypothetical protein; IMG reference gene:2512953753.
  
     0.474
RSP_0975
IMG reference gene:2512956012; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
  
     0.463
RSP_0707
IMG reference gene:2512955728; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.461
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.