node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSP_0111 | RSP_0118 | RSP_0111 | RSP_0118 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | 0.987 |
RSP_0111 | coxI | RSP_0111 | RSP_1877 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | Cytochrome c oxidase, aa3 type, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.954 |
RSP_0111 | coxII | RSP_0111 | RSP_1826 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | Cytochrome c oxidase polypeptide II precursor (Cytochrome AA3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.943 |
RSP_0111 | coxIII | RSP_0111 | RSP_1829 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | IMG reference gene:2512953738; PFAM: Cytochrome c oxidase subunit III. | 0.986 |
RSP_0111 | fbcB | RSP_0111 | RSP_1395 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.988 |
RSP_0111 | fbcF | RSP_0111 | RSP_1396 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | Ubiquinol-cytochrome C reductase, iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.863 |
RSP_0111 | nuoCD | RSP_0111 | RSP_0102 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.999 |
RSP_0111 | qoxB | RSP_0111 | RSP_3098 | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | QoxB, Quinol oxidase subunit II; IMG reference gene:2512956600; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; non-canonical start codon; truncated by 90 aa. | 0.930 |
RSP_0118 | RSP_0111 | RSP_0118 | RSP_0111 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected. | 0.987 |
RSP_0118 | ccoP | RSP_0118 | RSP_0693 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump; Belongs to the CcoP / FixP family. | 0.994 |
RSP_0118 | cox10 | RSP_0118 | RSP_1827 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.979 |
RSP_0118 | coxI | RSP_0118 | RSP_1877 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | Cytochrome c oxidase, aa3 type, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
RSP_0118 | coxII | RSP_0118 | RSP_1826 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | Cytochrome c oxidase polypeptide II precursor (Cytochrome AA3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.979 |
RSP_0118 | coxIII | RSP_0118 | RSP_1829 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | IMG reference gene:2512953738; PFAM: Cytochrome c oxidase subunit III. | 0.999 |
RSP_0118 | fbcB | RSP_0118 | RSP_1395 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
RSP_0118 | fbcF | RSP_0118 | RSP_1396 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | Ubiquinol-cytochrome C reductase, iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
RSP_0118 | nuoCD | RSP_0118 | RSP_0102 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.995 |
RSP_0118 | qoxB | RSP_0118 | RSP_3098 | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | QoxB, Quinol oxidase subunit II; IMG reference gene:2512956600; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; non-canonical start codon; truncated by 90 aa. | 0.779 |
ccoP | RSP_0118 | RSP_0693 | RSP_0118 | Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump; Belongs to the CcoP / FixP family. | IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c. | 0.994 |
ccoP | coxI | RSP_0693 | RSP_1877 | Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump; Belongs to the CcoP / FixP family. | Cytochrome c oxidase, aa3 type, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.971 |