STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1917Hypothetical protein; IMG reference gene:2512953829; PFAM: Cupin domain. (172 aa)    
Predicted Functional Partners:
RSP_1916
Putative 2-hydroxychromene-2-carboxylate isomerase; IMG reference gene:2512953828; PFAM: DSBA-like thioredoxin domain.
 
    0.883
RSP_6026
Putative acetyltransferase; IMG reference gene:2512953827; PFAM: Acetyltransferase (GNAT) family.
 
     0.851
RSP_1918
Putative alpha/beta hydrolase; IMG reference gene:2512953830.
 
     0.831
RSP_1915
Transcriptional regulator, LysR family; IMG reference gene:2512953826; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
    0.717
RSP_2598
ABC transporter, inner membrane subunit; IMG reference gene:2512954541; PFAM: Binding-protein-dependent transport system inner membrane component.
   
    0.623
RSP_3229
Membrane-bound lytic murein transglycosylase B; IMG reference gene:2512956740; PFAM: Putative peptidoglycan binding domain; TIGRFAM: lytic murein transglycosylase; truncated by 49 aa.
   
    0.614
RSP_3542
Integrase family protein; IMG reference gene:2512957051; PFAM: Integrase core domain; truncated by 11 aa.
  
     0.572
RSP_1919
Putative ATPase; IMG reference gene:2512953831.
 
     0.555
RSP_3383
Putative metal-dependent hydrolase; IMG reference gene:2512956894; PFAM: Putative cyclase.
  
    0.533
RSP_6075
Hypothetical protein; IMG reference gene:2512954814.
  
    0.527
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.