Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
RSP_1972Hypothetical protein; IMG reference gene:2512953886. (150 aa)    
Predicted Functional Partners:
RSP_1098
IMG reference gene:2512956143; PFAM: Protein of unknown function (DUF3035).
  
     0.773
RSP_1697
Hypothetical protein; IMG reference gene:2512953601; truncated by 10 aa.
  
     0.766
RSP_2018
Hypothetical protein; IMG reference gene:2512953935.
  
     0.758
RSP_6127
Hypothetical protein; IMG reference gene:2512955764.
  
     0.747
RSP_0841
IMG reference gene:2512955870; PFAM: Domain of unknown function (DUF3576).
  
     0.738
RSP_0381
Hypothetical protein; IMG reference gene:2512955391.
  
     0.718
RSP_2651
IMG reference gene:2512954596; PFAM: Protein of unknown function (DUF2927).
  
     0.710
RSP_0432
Yip1 domain-containing protein; IMG reference gene:2512955446; PFAM: Yip1 domain.
  
     0.698
RSP_1973
Cysteine desulfuration protein SufE; IMG reference gene:2512953887; PFAM: Fe-S metabolism associated domain.
  
    0.684
RSP_7577
Hypothetical protein; IMG reference gene:2512956242; new gene; replaced RSP_1198 on the opposite strand.
  
     0.684
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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