Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSP_1979Stress induced morphogen, BolA; IMG reference gene:2512953895; PFAM: BolA-like protein; Belongs to the BolA/IbaG family. (85 aa)    
Predicted Functional Partners:
RSP_2953
Glutaredoxin-related protein; IMG reference gene:2512954918; PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 
 0.855
RSP_1978
Molecular chaperone, DnaJ family; IMG reference gene:2512953894; PFAM: DnaJ domain.
   
   0.706
cobS
Cobaltochelatase CobS subunit; IMG reference gene:2512953893; PFAM: AAA domain (dynein-related subfamily); Cobaltochelatase CobS subunit N terminal; TIGRFAM: cobaltochelatase, CobS subunit; truncated by 20 aa.
       0.511
cobT
Cobaltochelatase CobT subunit; IMG reference gene:2512953890; PFAM: Cobalamin biosynthesis protein CobT VWA domain; Cobalamin biosynthesis protein CobT; TIGRFAM: cobaltochelatase, CobT subunit.
       0.458
RSP_1800
Hypothetical protein; IMG reference gene:2512953706; PFAM: Protein of unknown function (DUF498/DUF598).
  
     0.413
RSP_1975
IMG reference gene:2512953889; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
   
 
 0.410
wrbA
Trp repressor binding protein WrbA, putative; IMG reference gene:2512954270; PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV.
  
 
 0.405
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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