STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1985Hypothetical protein; IMG reference gene:2512953901. (147 aa)    
Predicted Functional Partners:
RSP_7566
Putative small protein; IMG reference gene:2512955772; PFAM: Protein of unknown function (DUF465); new gene.
  
     0.710
gatB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
       0.643
RSP_2816
Hypothetical protein; IMG reference gene:2512954795.
  
    0.626
RSP_6107
Hypothetical protein; IMG reference gene:2512955255.
  
     0.612
RSP_6207
Hypothetical protein; IMG reference gene:2512953402.
  
     0.573
RSP_1101
Hypothetical protein; IMG reference gene:2512956146; PFAM: Heparinase II/III-like protein.
  
    0.549
RSP_1006
Hypothetical protein; IMG reference gene:2512956044.
  
    0.547
RSP_1521
Hypothetical protein; IMG reference gene:2512953416.
  
    0.538
RSP_0731
Hypothetical protein; IMG reference gene:2512955755; TIGRFAM: MJ0042 family finger-like domain; frameshift eliminated due to sequence change; joined gene, RSP_0731, RSP_0732.
  
     0.529
RSP_1335
IMG reference gene:2512956382; PFAM: Flagellar hook-length control protein FliK; truncated by 637 aa.
  
     0.514
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.