STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2034IMG reference gene:2512953951; PFAM: CAAX amino terminal protease family. (244 aa)    
Predicted Functional Partners:
RSP_3159
ABC transporter, 2 fused ATPase and 1 inner membrane subunits; IMG reference gene:2512956668; PFAM: ABC transporter.
  
  
 0.769
RSP_6030
Hypothetical protein; IMG reference gene:2512953952.
       0.732
RSP_2033
Hypothetical protein; IMG reference gene:2512953950.
  
    0.572
RSP_0809
Nitroreductase; IMG reference gene:2512955837; PFAM: Nitroreductase family.
  
  
 0.554
RSP_3218
5,6-dimethylbenzimidazole synthase; IMG reference gene:2512956729; PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.554
RSP_2032
Putative hypothetical Gifsy-1 prophage protein; IMG reference gene:2512953949.
  
    0.527
RSP_2587
ABC multidrug efflux transporter, inner membrane subunit; IMG reference gene:2512954530; PFAM: ABC-2 type transporter; TIGRFAM: alcohol ABC transporter, permease protein.
  
  
 0.501
RSP_3157
ABC transporter, inner membrane subunit; IMG reference gene:2512956667.
  
  
 0.501
RSP_3273
ABC multidrug/carbohydrate efflux transporter, inner membrane subunit; IMG reference gene:2512956779; PFAM: ABC-2 type transporter.
  
  
 0.501
gpX
IMG reference gene:2512956867; PFAM: Phage Tail Protein X.
   
    0.457
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.