STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2119Hypothetical protein; IMG reference gene:2512954042; TIGRFAM: conserved hypothetical protein. (130 aa)    
Predicted Functional Partners:
RSP_2120
Putative D-lactate dehydrogenase (cytochrome), FAD/FMN-containing oxidoreductase; IMG reference gene:2512954043; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.
  
    0.775
RSP_2309
Hypothetical protein; IMG reference gene:2512954243; PFAM: TraB family; truncated by 33 aa.
  
    0.549
RSP_6205
Hypothetical protein; IMG reference gene:2512954595.
  
     0.510
RSP_0621
Putative DNA helicase; IMG reference gene:2512955637; PFAM: Helicase conserved C-terminal domain; UvrD/REP helicase; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family.
 
    0.495
RSP_2121
IMG reference gene:2512954044; PFAM: Protein of unknown function (DUF1638).
       0.489
RSP_7515
Hypothetical protein; IMG reference gene:2512954045; new gene.
       0.489
RSP_1027
Hypothetical protein; IMG reference gene:2512956066; PFAM: Zinc-finger domain; truncated by 13 aa.
  
    0.477
RSP_0371
Amino acid ABC transporter ATP-binding protein, PAAT family; IMG reference gene:2512955381; PFAM: ABC transporter.
   
    0.457
RSP_0590
Hypothetical protein; IMG reference gene:2512955606.
 
    0.441
RSP_1523
IMG reference gene:2512953418; PFAM: Phosphotransferase enzyme family.
  
    0.427
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.