STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtbCPutative dimethylamine corrinoid protein; IMG reference gene:2512954046; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain. (232 aa)    
Predicted Functional Partners:
RSP_2124
Methionine synthase I; IMG reference gene:2512954048; PFAM: Homocysteine S-methyltransferase.
  
 0.988
RSP_2768
Pterin binding enzyme; IMG reference gene:2512954718; PFAM: Pterin binding enzyme.
  
 0.986
RSP_3347
Methionine synthase (B12-dependent); IMG reference gene:2512956856; PFAM: Homocysteine S-methyltransferase.
  
 0.981
RSP_2121
IMG reference gene:2512954044; PFAM: Protein of unknown function (DUF1638).
 
    0.936
RSP_2770
Hypothetical protein; IMG reference gene:2512954720.
 
    0.830
RSP_2766
Putative metal-binding protein; IMG reference gene:2512954717.
 
    0.827
mttB
IMG reference gene:2512954800; PFAM: Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
  
 0.815
RSP_3739
Deoxyribose phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
   
 
 0.798
RSP_2769
Putative 5,10-methylenetetrahydrofolate reductase; IMG reference gene:2512954719; truncated by 14 aa.
 
 
  0.785
pheAa
Chorismate mutase; IMG reference gene:2512956089; PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type.
      
 0.748
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.