STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2136Hypothetical protein; IMG reference gene:2512954058. (404 aa)    
Predicted Functional Partners:
RSP_1467
Alkane 1-monooxygenase; IMG reference gene:2512953360; PFAM: Fatty acid desaturase.
  
  
 0.761
RSP_2930
Hypothetical protein; IMG reference gene:2512954892.
  
   
 0.757
ccdA
IMG reference gene:2512954057; PFAM: Cytochrome C biogenesis protein transmembrane region.
  
  
 0.753
RSP_0861
Putative transmembrane hypothetical protein; IMG reference gene:2512955892.
  
     0.748
RSP_1011
Hypothetical protein; IMG reference gene:2512956048.
  
     0.676
RSP_6008
Sporulation and cell division-related protein; IMG reference gene:2512953496; PFAM: Sporulation related domain.
  
     0.645
RSP_0354
Hypothetical protein; IMG reference gene:2512955364.
  
    0.644
RSP_0453
Hypothetical protein; IMG reference gene:2512955463.
  
    0.631
RSP_1327
Putative flagellar basal body rod protein; IMG reference gene:2512956373; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins.
   
   0.601
RSP_1472
Hypothetical protein; IMG reference gene:2512953365.
  
    0.599
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.