STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2139Hypothetical protein; IMG reference gene:2512954062; PFAM: Stringent starvation protein B. (152 aa)    
Predicted Functional Partners:
RSP_0714
Hypothetical protein; IMG reference gene:2512955736; PFAM: Protein of unknown function (DUF1013).
  
   
 0.790
RSP_0164
Hypothetical protein; IMG reference gene:2512955161; PFAM: Uncharacterized protein conserved in bacteria (DUF2312).
  
   
 0.778
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.775
RSP_1659
Hypothetical protein; IMG reference gene:2512953562; PFAM: Uncharacterized protein conserved in bacteria (DUF2312).
  
   
 0.773
RSP_2078
Hypothetical protein; IMG reference gene:2512953998; PFAM: Uncharacterized protein conserved in bacteria (DUF2312).
  
   
 0.773
RSP_3610
Hypothetical protein; IMG reference gene:2512957125; PFAM: Uncharacterized protein conserved in bacteria (DUF2312).
  
   
 0.773
RSP_2135
Hypothetical protein; IMG reference gene:2512954059.
 
    0.729
RSP_1239
Hypothetical protein; IMG reference gene:2512956283; PFAM: Tim44-like domain.
  
     0.717
Gst
IMG reference gene:2512956187; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; truncated by 20 aa.
  
    0.714
RSP_2898
IMG reference gene:2512954860; PFAM: DNA polymerase III chi subunit, HolC.
  
    0.713
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.