STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2149Ala-tRNA(Pro) hydrolase; IMG reference gene:2512954073; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A). (239 aa)    
Predicted Functional Partners:
RSP_2148
IMG reference gene:2512954072; PFAM: Mechanosensitive ion channel; Protein of unknown function (DUF3772).
  
    0.826
cysK
O-acetylserine (Thiol)-lyase, cysteine synthase; IMG reference gene:2512954071; PFAM: Pyridoxal-phosphate dependent enzyme.
  
    0.823
trgA
Tellurite resistance protein; IMG reference gene:2512954069.
 
    0.716
trgB
Tellurite resistance protein; IMG reference gene:2512954070; PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family.
  
    0.574
ufaM
Unsaturated fatty acid methylase; IMG reference gene:2512954068; PFAM: Mycolic acid cyclopropane synthetase.
       0.496
RSP_6097
Hypothetical protein; IMG reference gene:2512955139.
  
     0.464
RSP_0459
Hypothetical protein; IMG reference gene:2512955469; PFAM: Protein of unknown function (DUF475).
   
    0.457
ftsI
IMG reference gene:2512954022; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain.
   
    0.457
RSP_3759
Putative endonuclease; IMG reference gene:2512957290; truncated by 24 aa.
   
    0.457
RSP_0861
Putative transmembrane hypothetical protein; IMG reference gene:2512955892.
  
    0.445
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.