STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2174Putative ABC transporter, inner membrane subunit; IMG reference gene:2512954097; PFAM: Cobalt transport protein. (196 aa)    
Predicted Functional Partners:
RSP_2175
ABC transporter, ATPase subunit; IMG reference gene:2512954098; PFAM: ABC transporter.
 
 0.999
RSP_2173
Hypothetical protein; IMG reference gene:2512954096; PFAM: BioY family.
 
 0.998
RSP_1924
BioY family protein; IMG reference gene:2512953837; PFAM: BioY family; extended by 40 aa.
  
 0.967
cbiO
ABC cobalt transporter, ATPase subunit, CbiO; IMG reference gene:2512956723; PFAM: ABC transporter.
 
 
 0.965
RSP_3186
Hypothetical protein; IMG reference gene:2512956695.
 
 
 0.919
RSP_3207
Putative cobalamin biosynthesis protein CbiM; IMG reference gene:2512956720; PFAM: Cobalt uptake substrate-specific transmembrane region.
  
 
 0.906
RSP_1454
ABC peptide/nickel/opine transporter, fused ATPase subunits; IMG reference gene:2512953345; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
  
 
 0.723
RSP_2700
ABC oligo/dipeptide transporter, fused ATPase subunits; IMG reference gene:2512954644; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
  
 
 0.723
RSP_3236
ABC peptide transporter, ATPase subunit; IMG reference gene:2512956746; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region.
  
 
 0.723
RSP_3249
IMG reference gene:2512956756; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
  
 
 0.723
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.