node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSP_2317 | RSP_2318 | RSP_2317 | RSP_2318 | IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase. | IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.963 |
RSP_2317 | RSP_2320 | RSP_2317 | RSP_2320 | IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase. | IMG reference gene:2512954254; PFAM: Bacterial extracellular solute-binding protein, family 7. | 0.847 |
RSP_2317 | dadA | RSP_2317 | RSP_2316 | IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase. | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | 0.628 |
RSP_2317 | glnA | RSP_2317 | RSP_2319 | IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase. | Glutamine synthetase class-I; IMG reference gene:2512954253; PFAM: Glutamine synthetase, catalytic domain. | 0.914 |
RSP_2318 | RSP_2317 | RSP_2318 | RSP_2317 | IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase. | 0.963 |
RSP_2318 | RSP_2320 | RSP_2318 | RSP_2320 | IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | IMG reference gene:2512954254; PFAM: Bacterial extracellular solute-binding protein, family 7. | 0.884 |
RSP_2318 | dadA | RSP_2318 | RSP_2316 | IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | 0.641 |
RSP_2318 | glnA | RSP_2318 | RSP_2319 | IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | Glutamine synthetase class-I; IMG reference gene:2512954253; PFAM: Glutamine synthetase, catalytic domain. | 0.939 |
RSP_2320 | RSP_2317 | RSP_2320 | RSP_2317 | IMG reference gene:2512954254; PFAM: Bacterial extracellular solute-binding protein, family 7. | IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase. | 0.847 |
RSP_2320 | RSP_2318 | RSP_2320 | RSP_2318 | IMG reference gene:2512954254; PFAM: Bacterial extracellular solute-binding protein, family 7. | IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.884 |
RSP_2320 | dadA | RSP_2320 | RSP_2316 | IMG reference gene:2512954254; PFAM: Bacterial extracellular solute-binding protein, family 7. | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | 0.462 |
RSP_2320 | glnA | RSP_2320 | RSP_2319 | IMG reference gene:2512954254; PFAM: Bacterial extracellular solute-binding protein, family 7. | Glutamine synthetase class-I; IMG reference gene:2512954253; PFAM: Glutamine synthetase, catalytic domain. | 0.883 |
RSP_2690 | dadA | RSP_2690 | RSP_2316 | IMG reference gene:2512954635; PFAM: Sarcosine oxidase, gamma subunit family; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form. | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | 0.435 |
RSP_2690 | soxA | RSP_2690 | RSP_2689 | IMG reference gene:2512954635; PFAM: Sarcosine oxidase, gamma subunit family; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form. | Putative sarcosine oxidase, alpha subunit; IMG reference gene:2512954634; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | 0.999 |
RSP_2690 | soxD | RSP_2690 | RSP_2688 | IMG reference gene:2512954635; PFAM: Sarcosine oxidase, gamma subunit family; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form. | IMG reference gene:2512954633; PFAM: Sarcosine oxidase, delta subunit family; TIGRFAM: sarcosine oxidase, delta subunit family, heterotetrameric form. | 0.999 |
RSP_2690 | stcD2 | RSP_2690 | RSP_3681 | IMG reference gene:2512954635; PFAM: Sarcosine oxidase, gamma subunit family; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form. | Putative NADH-dependent oxidase; IMG reference gene:2512957216; PFAM: HI0933-like protein; NADH:flavin oxidoreductase / NADH oxidase family; frameshift in old version eliminated, translation corrected; truncated by 10 aa. | 0.880 |
RSP_3519 | dadA | RSP_3519 | RSP_2316 | Proline racemase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is involved in a degradation pathway that converts t4LHyp to alpha-ketoglutarate, which allows R.sphaeroides to grow on t4LHyp as a sole carbon source. Displays no proline racemase activity. | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | 0.578 |
alr | dadA | RSP_2460 | RSP_2316 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | 0.448 |
dadA | RSP_2317 | RSP_2316 | RSP_2317 | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase. | 0.628 |
dadA | RSP_2318 | RSP_2316 | RSP_2318 | D-amino acid dehydrogenase; IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase. | IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.641 |