STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2355HNH nuclease / Probable phage PHI-105 holin-like protein; IMG reference gene:2512954297; PFAM: HNH endonuclease. (116 aa)    
Predicted Functional Partners:
RSP_2360
Putative head portal protein, HK97 family; IMG reference gene:2512954301; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
    0.954
RSP_2358
IMG reference gene:2512954299; PFAM: Caudovirus prohead protease; Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family; phage prohead protease, HK97 family; extended by 111 aa.
 
    0.945
RSP_2353
Phage terminase, small subunit, putative, P27 family; IMG reference gene:2512954291; PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family.
 
    0.856
RSP_1650
Phage terminase-like protein, large subunit; IMG reference gene:2512953551; PFAM: Phage Terminase.
 
  
 0.836
RSP_2352
Putative terminase large subunit / phage terminase; IMG reference gene:2512954290; PFAM: Phage Terminase; extended by 26 aa.
 
  
 0.836
RSP_2998
Phage terminase-like protein, large subunit; IMG reference gene:2512954974; PFAM: Phage Terminase.
 
  
 0.836
RSP_2070
Putative Phage-related terminase; IMG reference gene:2512953986; PFAM: Phage Terminase.
 
  
 0.808
RSP_1648
Phage portal protein, HK97 family; IMG reference gene:2512953548; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
    0.806
RSP_2069
Putative phage portal protein, HK97 family; IMG reference gene:2512953985; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
    0.802
RSP_2997
Putative head portal protein; IMG reference gene:2512954973; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
    0.802
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.