STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2370Putative sugar kinase; IMG reference gene:2512954310; PFAM: pfkB family carbohydrate kinase. (316 aa)    
Predicted Functional Partners:
RSP_2367
Monosaccharide ABC transporter membrane protein, CUT2 family; IMG reference gene:2512954309; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.866
RSP_2368
Monosaccharide ABC transporter membrane protein, CUT2 family; IMG reference gene:2512954308; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.844
RSP_2371
3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR; IMG reference gene:2512954311; PFAM: short chain dehydrogenase.
  
   0.809
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.799
rbsK-3
Carbohydrate kinase, PfkB family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
     0.732
rbsK
Putative RbsK, Carbohydrate kinase, ribokinase family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
     0.680
RSP_2372
IMG reference gene:2512954312; PFAM: Aldehyde dehydrogenase family.
  
 
 0.665
RSP_2365
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; IMG reference gene:2512954306; PFAM: family.
 
  
 0.652
fucA
L-fuculose phosphate aldolase (Class II); IMG reference gene:2512954305; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
 
  
 0.566
RSP_3671
D-tagatose 3-epimerase; IMG reference gene:2512957205; PFAM: Xylose isomerase-like TIM barrel.
 
  
 0.558
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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