STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2383Putative integral membrane protein; IMG reference gene:2512954326; PFAM: Protein of unknown function (DUF1469). (133 aa)    
Predicted Functional Partners:
RSP_2382
IMG reference gene:2512954325; PFAM: Protein of unknown function (DUF3618).
 
     0.963
RSP_6050
Hypothetical protein; IMG reference gene:2512954327.
 
     0.953
RSP_2660
IMG reference gene:2512954605; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); truncated by 51 aa.
 
    0.750
RSP_1184
Ribonuclease BN; IMG reference gene:2512956229; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
 
    0.592
RSP_2384
Putative stress protein (general stress protein 26); IMG reference gene:2512954328.
  
    0.507
RSP_0855
Putative membrane protein; IMG reference gene:2512955885; PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG).
  
    0.467
RSP_0113
IMG reference gene:2512955104; PFAM: Phospholipase D Active site motif; truncated by 15 aa.
  
    0.463
RSP_0518
Putative glycosyltransferase protein; IMG reference gene:2512955530; PFAM: Glycosyl transferases group 1.
  
    0.426
cypC
Putative fatty acid beta hydroxylase (cytochrome P450); IMG reference gene:2512954319; PFAM: Cytochrome P450.
  
    0.412
RSP_3051
Putative phosphatase; IMG reference gene:2512956552; PFAM: Bacterial protein of unknown function (DUF839).
  
     0.408
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.