STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2384Putative stress protein (general stress protein 26); IMG reference gene:2512954328. (165 aa)    
Predicted Functional Partners:
RSP_1270
Hypothetical protein; IMG reference gene:2512956314; PFAM: CsbD-like; truncated by 9 aa; Belongs to the UPF0337 (CsbD) family.
  
    0.893
RSP_2385
Hypothetical protein; IMG reference gene:2512954329.
   
  
 0.833
RSP_6224
Putative membrane protein; IMG reference gene:2512954330; PFAM: Phosphate-starvation-inducible E; extended by 51 aa.
      
 0.833
RSP_1912
Putative acetyltransferase; IMG reference gene:2512953822; PFAM: Acetyltransferase (GNAT) family; extended by 17 aa.
   
    0.816
RSP_2382
IMG reference gene:2512954325; PFAM: Protein of unknown function (DUF3618).
 
    0.615
carB
IMG reference gene:2512955846; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; truncated by 4 aa; Belongs to the CarB family.
      
 0.613
RSP_6050
Hypothetical protein; IMG reference gene:2512954327.
 
     0.568
pfpI
IMG reference gene:2512954513; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family.
 
  
 0.567
RSP_2660
IMG reference gene:2512954605; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); truncated by 51 aa.
 
    0.511
RSP_2383
Putative integral membrane protein; IMG reference gene:2512954326; PFAM: Protein of unknown function (DUF1469).
  
    0.507
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.