STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2419Putative sterol carrier protein; IMG reference gene:2512954364; PFAM: SCP-2 sterol transfer family. (94 aa)    
Predicted Functional Partners:
pldB
Putative Esterase/lipase/thioesterase; IMG reference gene:2512954363.
  
    0.844
RSP_2423
Heat shock protein Hsp15; IMG reference gene:2512954367; PFAM: S4 domain.
       0.694
mgpS
Putative ATP-dependent helicase, MgpS; IMG reference gene:2512954366; PFAM: Helicase conserved C-terminal domain; extended by 25 aa.
       0.693
RSP_2421
Hypothetical protein; IMG reference gene:2512954365.
  
    0.662
RSP_6107
Hypothetical protein; IMG reference gene:2512955255.
  
     0.625
RSP_2424
Ferredoxin II; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.591
RSP_3588
Putative integral membrane protein; IMG reference gene:2512957101; PFAM: Protein of unknown function (DUF1049); truncated by 6 aa.
  
    0.508
RSP_3071
Putative hydroxypyruvate reductase/glycerate kinase; IMG reference gene:2512956571; PFAM: MOFRL family.
   
    0.457
RSP_6129
Hypothetical protein; IMG reference gene:2512955777.
  
     0.447
RSP_0959
ATPase; IMG reference gene:2512955995; truncated by 58 aa.
  
    0.446
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.