STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2421Hypothetical protein; IMG reference gene:2512954365. (190 aa)    
Predicted Functional Partners:
RSP_2423
Heat shock protein Hsp15; IMG reference gene:2512954367; PFAM: S4 domain.
       0.831
mgpS
Putative ATP-dependent helicase, MgpS; IMG reference gene:2512954366; PFAM: Helicase conserved C-terminal domain; extended by 25 aa.
       0.815
pldB
Putative Esterase/lipase/thioesterase; IMG reference gene:2512954363.
 
     0.702
dcd
IMG reference gene:2512954552; PFAM: 2'-deoxycytidine 5'-triphosphate deaminase (DCD).
  
     0.693
RSP_2424
Ferredoxin II; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.679
RSP_0730
TIGR02302 family protein; IMG reference gene:2512955754; TIGRFAM: TIGR02302 family protein.
  
    0.663
RSP_2419
Putative sterol carrier protein; IMG reference gene:2512954364; PFAM: SCP-2 sterol transfer family.
  
    0.662
RSP_1022
IMG reference gene:2512956061; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
  
    0.638
hisS
histidyl-tRNA synthetase; IMG reference gene:2512957061; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase.
 
     0.530
RSP_6144
Putative membrane protein; IMG reference gene:2512956060; PFAM: Protein of unknown function (DUF1355).
  
     0.528
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.