STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2492Putative transporter, RhaT family, DMT superfamily; IMG reference gene:2512954439; PFAM: EamA-like transporter family. (294 aa)    
Predicted Functional Partners:
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
   0.781
RSP_2053
Putative transporter, RarD family, DMT superfamily; IMG reference gene:2512953968; PFAM: EamA-like transporter family.
  
     0.729
fur
Manganese uptake regulator, Fur family; IMG reference gene:2512954440; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
    0.716
RSP_1569
Glutamate-1-semialdehyde 2,1-aminomutase; IMG reference gene:2512953464; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
    0.680
RSP_2154
Hypothetical protein; IMG reference gene:2512954078.
   
    0.463
RSP_3680
Transcriptional regulator, TetR family; IMG reference gene:2512957215; PFAM: Bacterial regulatory proteins, tetR family.
  
    0.425
RSP_1600
Putative transporter, DME family, DMT superfamily; IMG reference gene:2512953499; PFAM: EamA-like transporter family.
  
     0.418
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.