STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhIAlcohol dehydrogenase class III; Oxidizes long-chain aliphatic alcohols, long-chain hydroxylated fatty acids and S-hydroxymethylglutathione (hmGSH) in increasing order of preference. Shows little or no activity with short- chain aliphatic alcohols; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (376 aa)    
Predicted Functional Partners:
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
gfa
Glutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.
   
 0.996
RSP_1292
IMG reference gene:2512956338; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 0.931
adh
IMG reference gene:2512953732; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
  
 
 
0.921
RSP_1507
Aldehyde dehydrogenase; IMG reference gene:2512953399; PFAM: Aldehyde dehydrogenase family.
 
 0.919
RSP_3740
Aldehyde dehydrogenase; IMG reference gene:2512957273; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 0.918
RSP_2372
IMG reference gene:2512954312; PFAM: Aldehyde dehydrogenase family.
 
 0.917
RSP_1467
Alkane 1-monooxygenase; IMG reference gene:2512953360; PFAM: Fatty acid desaturase.
  
 
 0.905
cycI
Isocytochrome c2; IMG reference gene:2512954520; PFAM: Cytochrome c.
  
  
 0.905
xoxF
Putative pqq dehydrogenase protein; IMG reference gene:2512954521; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family.
  
  
 0.874
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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