STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2617Peptide methionine sulfoxide reductase; IMG reference gene:2512954561; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase. (134 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.998
RSP_2314
Oxidoreductase, Chromogranin/secretogranin; IMG reference gene:2512954248; PFAM: Aldo/keto reductase family.
  
  
 0.832
RSP_3274
ABC multidrug/carbohydrate efflux transporter, ATPase subunit; IMG reference gene:2512956780; PFAM: ABC transporter.
   
 
 0.831
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.808
RSP_2389
IMG reference gene:2512954334; PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.805
hslO
Putative Hsp33 protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
   
  
 0.782
RSP_0725
Thioredoxin, thioldisulfide interchange protein; IMG reference gene:2512955748; PFAM: AhpC/TSA family.
   
 0.781
ccmG
Putative thiol-disulfide interchange protein; IMG reference gene:2512953711; PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily.
  
 0.781
rplT
LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.732
hslV
HslV component of HslUV peptidase; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
   
  
 0.727
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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