STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2620IMG reference gene:2512954564; PFAM: Protein of unknown function (DUF1153). (92 aa)    
Predicted Functional Partners:
RSP_1500
Putative anti-sigma regulatory kinase; IMG reference gene:2512953392; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
    0.906
fliC
Flagellar filament protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
  
 0.901
RSP_6148
Putative HPT, Histidine Phosphotransfer domain protein; IMG reference gene:2512956254; PFAM: Hpt domain.
   
    0.861
RSP_1304
Flagellar hook-associated protein; IMG reference gene:2512956350; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK.
  
    0.858
RSP_2220
Putative flagellar motor switch protein (fliG); IMG reference gene:2512954148; PFAM: FliG C-terminal domain.
  
    0.858
fliG
Putative flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.856
dorS
IMG reference gene:2512956545; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain.
   
    0.742
RSP_1904
Putative Flp pilus assembly protein TadB; IMG reference gene:2512953813; PFAM: Bacterial type II secretion system protein F domain.
   
    0.733
RSP_0335
Diguanylate cyclase/phosphodiesterase; IMG reference gene:2512955345; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
   
    0.731
RSP_1063
Diguanylate cyclase/phosphodiesterase; IMG reference gene:2512956104; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
   
    0.731
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.