STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2640Putative membrane protein/domain protein; IMG reference gene:2512954583; PFAM: RDD family. (150 aa)    
Predicted Functional Partners:
RSP_2423
Heat shock protein Hsp15; IMG reference gene:2512954367; PFAM: S4 domain.
  
    0.824
bpt
arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
  
  
 0.764
RSP_2641
IMG reference gene:2512954584; PFAM: Protein of unknown function (DUF2852).
 
    0.740
RSP_2651
IMG reference gene:2512954596; PFAM: Protein of unknown function (DUF2927).
  
     0.724
RSP_2849
Putative membrane protein; IMG reference gene:2512954755.
  
     0.720
RSP_2265
IMG reference gene:2512954195; PFAM: 5-bromo-4-chloroindolyl phosphate hydrolysis protein.
 
    0.656
RSP_2271
Hypothetical protein; IMG reference gene:2512954203; truncated by 30 aa.
  
     0.639
RSP_6083
Hypothetical protein; IMG reference gene:2512955005.
  
     0.636
RSP_0381
Hypothetical protein; IMG reference gene:2512955391.
  
    0.620
RSP_0433
Yip1 domain-containing protein; IMG reference gene:2512955447; PFAM: Yip1 domain.
  
     0.612
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.