STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2648Putative nucleic acid-binding protein, contains PIN domain; IMG reference gene:2512954592. (180 aa)    
Predicted Functional Partners:
RSP_2647
SAM-dependent methyltransferase; IMG reference gene:2512954591; PFAM: S-adenosylmethionine-dependent methyltransferase.
  
    0.845
RSP_6083
Hypothetical protein; IMG reference gene:2512955005.
  
     0.689
RSP_6107
Hypothetical protein; IMG reference gene:2512955255.
  
     0.651
RSP_0163
Putative iron(III) ABC transporter, fused inner membrane subunits; IMG reference gene:2512955160; PFAM: Binding-protein-dependent transport system inner membrane component.
   
    0.618
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
    0.569
RSP_1011
Hypothetical protein; IMG reference gene:2512956048.
  
    0.531
RSP_2190
Hypothetical protein; IMG reference gene:2512954116.
  
    0.522
RSP_2816
Hypothetical protein; IMG reference gene:2512954795.
 
     0.515
RSP_1809
Putative membrane protein; IMG reference gene:2512953716; PFAM: Rhomboid family; extended by 114 aa; old pseudo, frameshift corrected.
  
     0.471
RSP_7527
Hypothetical protein; IMG reference gene:2512954590; new gene.
       0.453
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.