Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSP_2829Putative metal-binding protein; IMG reference gene:2512954779; PFAM: Protein of unknown function (DUF1636). (119 aa)    
Predicted Functional Partners:
cobI
Precorrin-2 C20-methyltransferase; IMG reference gene:2512954783; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
    0.946
cobN
Cobaltochelatase CobN subunit; IMG reference gene:2512954781; PFAM: CobN/Magnesium Chelatase.
 
    0.942
cobW
Cobalamin synthesis protein CobW; IMG reference gene:2512954780; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; TIGRFAM: cobalamin biosynthesis protein CobW.
 
    0.940
cobH
IMG reference gene:2512954782; PFAM: Precorrin-8X methylmutase.
 
     0.909
cobJ
Precorrin-3 methyltransferase; IMG reference gene:2512954784; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase.
 
    0.906
RSP_2726
Multidrug/metabolite efflux pump, Major facilitator superfamily (MFS); IMG reference gene:2512954671; PFAM: Major Facilitator Superfamily.
      
 0.808
cobE
Putative precorrin methylase; IMG reference gene:2512954787; PFAM: Cobalamin synthesis G C-terminus.
 
    0.789
cobF
precorrin-6A synthase (deacetylating); Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.
 
    0.725
cobL
Putative Precorrin-6y C5,15-methyltransferase; IMG reference gene:2512954786; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
 
    0.681
cobC
L-threonine O-3-phosphate decarboxylase; IMG reference gene:2512955816; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase.
 
    0.571
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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