STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2930Hypothetical protein; IMG reference gene:2512954892. (207 aa)    
Predicted Functional Partners:
RSP_1113
IMG reference gene:2512956157; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
 
 
 0.925
RSP_1114
IMG reference gene:2512956158; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
 
 
 0.924
expE1
IMG reference gene:2512957020; PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass).
 
 
 0.908
RSP_1495
DNA translocase FtsK; IMG reference gene:2512953387; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
   
 
 0.818
RSP_0861
Putative transmembrane hypothetical protein; IMG reference gene:2512955892.
  
     0.759
RSP_2136
Hypothetical protein; IMG reference gene:2512954058.
  
   
 0.757
RSP_1301
Putative peptidase; IMG reference gene:2512956346; PFAM: Subtilase family.
  
 
 0.756
RSP_0354
Hypothetical protein; IMG reference gene:2512955364.
  
     0.752
RSP_1472
Hypothetical protein; IMG reference gene:2512953365.
  
    0.740
RSP_1011
Hypothetical protein; IMG reference gene:2512956048.
  
     0.730
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.