STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutFFormiminoglutamate deiminase; IMG reference gene:2512954896; PFAM: Amidohydrolase family; TIGRFAM: formiminoglutamate deiminase. (455 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; IMG reference gene:2512954897; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 
 0.991
hutC
Histidine utilization repressor, gntR family; IMG reference gene:2512954895; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial.
  
 0.979
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.909
hutH-2
Histidine ammonia-lyase; Catalyzes the non-oxidative deamination of L-tyrosine. Has very low phenylalanine ammonia-lyase activity (in vitro). Belongs to the PAL/histidase family.
 
  
 0.889
hutH
Histidine ammonia-lyase; IMG reference gene:2512954898; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.881
RSP_1399
IMG reference gene:2512956447; PFAM: N-formylglutamate amidohydrolase.
 
 
 0.707
RSP_3433
Transcriptionalregulator, CopG family; IMG reference gene:2512956944; PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR.
   
    0.580
RSP_2323
IMG reference gene:2512954257; PFAM: N-formylglutamate amidohydrolase.
  
 
  0.573
RSP_1767
IMG reference gene:2512953672; PFAM: N-formylglutamate amidohydrolase.
     
  0.499
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.