STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2955Hypothetical protein; IMG reference gene:2512954920. (155 aa)    
Predicted Functional Partners:
RSP_2954
Hypothetical protein; IMG reference gene:2512954919; PFAM: Cell division protein ZapA.
 
  
 0.936
RSP_3601
Lipolytic enzyme, G-D-S-L family; IMG reference gene:2512957114; PFAM: GDSL-like Lipase/Acylhydrolase.
  
 
 0.886
RSP_1525
Putative Helicase/Exonuclease; IMG reference gene:2512953420; TIGRFAM: double-strand break repair protein AddB, alphaproteobacterial type.
  
    0.790
RSP_0202
Uncharacterized protein with SCP/PR1 domains; IMG reference gene:2512955199; PFAM: Cysteine-rich secretory protein family.
  
    0.735
RSP_1200
Uncharacterized protein with SCP/PR1 domains; IMG reference gene:2512956244; PFAM: Cysteine-rich secretory protein family; truncated by 5 aa.
  
    0.735
RSP_1521
Hypothetical protein; IMG reference gene:2512953416.
  
   
 0.734
RSP_6204
Outer membrane protein; IMG reference gene:2512954657; PFAM: Outer membrane protein (OmpH-like).
  
     0.727
RSP_3136
IMG reference gene:2512956645; PFAM: Protein of unknown function (DUF1593).
  
 
 0.721
RSP_2942
Sporulation and cell division-related protein; IMG reference gene:2512954907; PFAM: Sporulation related domain.
 
     0.705
RSP_6232
Hypothetical protein; IMG reference gene:2512956477.
  
     0.662
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.