STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_2994Hypothetical protein; IMG reference gene:2512954962. (773 aa)    
Predicted Functional Partners:
RSP_2993
Hypothetical protein; IMG reference gene:2512954961.
  
  
 0.835
RSP_2992
Hypothetical protein; IMG reference gene:2512954960; extended by 21 aa.
  
    0.787
RSP_3783
IMG reference gene:2512957312; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family.
 
    0.773
RSP_2990
Hypothetical protein; IMG reference gene:2512954958; extended by 52 aa.
 
    0.761
RSP_2996
Prohead peptidase; IMG reference gene:2512954972; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.
 
    0.727
RSP_3785
Putative bacteriophage-related protein; IMG reference gene:2512957309.
 
    0.691
RSP_2991
Hypothetical protein; IMG reference gene:2512954959; extended by 31 aa.
  
    0.657
RSP_3781
IMG reference gene:2512957314; PFAM: Phage terminase large subunit (GpA).
 
    0.596
RSP_7538
Hypothetical protein; IMG reference gene:2512954963; new gene.
       0.594
RSP_3118
Hypothetical protein; IMG reference gene:2512956624.
   
    0.457
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.