STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dorXDMSO reductase regulatory protein DorX; IMG reference gene:2512956541; PFAM: Bacterial regulatory proteins, luxR family. (257 aa)    
Predicted Functional Partners:
dorS
IMG reference gene:2512956545; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain.
  
 
 0.952
dorY
DMSO reductase regulatory protein DorY; IMG reference gene:2512956542.
     
 0.929
dorR
DMSO/TMAO-two component transcriptional regulator, winged helix family; IMG reference gene:2512956546; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
   
 
 0.822
RSP_1306
PAS sensor Signal Tranduction Histidine Kinase; IMG reference gene:2512956353; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.742
RSP_0085
Multisensor hybrid histidine kinase; IMG reference gene:2512955075; PFAM: Response regulator receiver domain; His Kinase A (phospho-acceptor) domain; PAS fold; Hpt domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box; truncated by 19 aa.
  
 
 0.735
dorC
DMSO/TMAO pentaheme cytochrome c subunit; IMG reference gene:2512956547; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; Belongs to the TorC/TorY family.
   
  
 0.714
RSP_3040
ABC permidine/putrescine transporter, periplasmic substrate-binding protein; IMG reference gene:2512956539; PFAM: Bacterial extracellular solute-binding protein.
 
    0.681
rdxB
Iron-sulfur cluster-binding protein; Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen.
     
 0.676
RSP_3037
Putative short-chain dehydrogenase/reductase; IMG reference gene:2512956536; PFAM: short chain dehydrogenase.
 
    0.663
RSP_1567
Putative sensory transduction histidine kinase; IMG reference gene:2512953462; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.650
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.