STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dorCDMSO/TMAO pentaheme cytochrome c subunit; IMG reference gene:2512956547; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; Belongs to the TorC/TorY family. (392 aa)    
Predicted Functional Partners:
dorB
DMSO-membrane protein; IMG reference gene:2512956548; PFAM: Nitrate reductase delta subunit.
  
 
 0.999
dorA
DMSO/TMAO-reductase; IMG reference gene:2512956549; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence.
 
 0.999
dorR
DMSO/TMAO-two component transcriptional regulator, winged helix family; IMG reference gene:2512956546; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
  
 0.914
cycG
Diheme class I cytochrome c; Particularly expressed when cells generate energy via aerobic respiration.
 
 
  
 0.902
mttB
IMG reference gene:2512954800; PFAM: Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
   
 
  0.900
RSP_1821
Molybdopterin-containing oxidoreductase, putative formate dehydrogenase; IMG reference gene:2512953729; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.897
dorS
IMG reference gene:2512956545; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain.
  
 
 0.897
RSP_2718
Putative outer membrane protein; IMG reference gene:2512954663.
  
 
 0.881
rdxB
Iron-sulfur cluster-binding protein; Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen.
  
 
 0.791
msrP
Sulfite oxidase-like oxidoreductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce bo [...]
      
 0.745
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.