STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3061Hypothetical protein; IMG reference gene:2512956563. (103 aa)    
Predicted Functional Partners:
RSP_3062
AMP-dependent synthetase and ligase; IMG reference gene:2512956564; PFAM: short chain dehydrogenase.
  
    0.836
RSP_3063
Transcriptional regulator, DeoR family; IMG reference gene:2512956565; PFAM: AMP-binding enzyme.
  
    0.784
cysE-2
Putative O-acetylserine synthase; IMG reference gene:2512956562; PFAM: Bacterial transferase hexapeptide (three repeats); extended by 41 aa.
  
    0.692
RSP_3064
Transcriptional regulator, DeoR family; IMG reference gene:2512956566; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
       0.476
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.