STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3075TIGR03440 family protein; IMG reference gene:2512956576; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein. (415 aa)    
Predicted Functional Partners:
RSP_3076
Putative methyltransferase; IMG reference gene:2512956577; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase.
  
 0.998
RSP_0594
Putative choline sulfatase; IMG reference gene:2512955609; PFAM: Choline sulfatase enzyme C terminal; Sulfatase; TIGRFAM: choline-sulfatase.
  
   0.751
RSP_1974
Hypothetical protein; IMG reference gene:2512953888; PFAM: Domain of unknown function (DUF427).
 
     0.527
RSP_0449
IMG reference gene:2512955459; PFAM: Glutamine amidotransferases class-II.
  
  
 0.469
ilvD
IMG reference gene:2512956575; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.464
gshA
Putative glutathione synthetase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
  
  
 0.437
RSP_3488
Hypothetical protein; IMG reference gene:2512956998; PFAM: Uncharacterized protein conserved in bacteria (DUF2094); TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; truncated by 6 aa.
  
    0.419
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.