STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3132ABC-type transport system, involved in lipoprotein release, permease component; IMG reference gene:2512956640. (396 aa)    
Predicted Functional Partners:
RSP_3131
ABC (antimicrobial peptide) transporter, ATPase subunit; IMG reference gene:2512956639; PFAM: ABC transporter.
 
 
 0.964
RSP_3133
Hypothetical protein; IMG reference gene:2512956641; PFAM: Formylglycine-generating sulfatase enzyme.
 
    0.964
RSP_3135
ppkA-related protein; IMG reference gene:2512956644.
    0.959
RSP_3130
Putative serine protease; IMG reference gene:2512956638; PFAM: FHA domain.
 
    0.848
LolD
ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 
 0.840
RSP_3129
IMG reference gene:2512956637; PFAM: Protein kinase domain.
  
    0.815
RSP_3374
ABC efflux transporter, ATPase subunit; IMG reference gene:2512956885; PFAM: ABC transporter; extended by 22 aa.
  
 
 0.802
RSP_1542
ABC transporter, ATPase subunit; IMG reference gene:2512953436; PFAM: ABC transporter.
 
 
 0.782
RSP_3134
IMG reference gene:2512956643; PFAM: Protein kinase domain; truncated by 3 aa.
 
    0.781
RSP_1497
Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.763
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.