STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3133Hypothetical protein; IMG reference gene:2512956641; PFAM: Formylglycine-generating sulfatase enzyme. (538 aa)    
Predicted Functional Partners:
RSP_3132
ABC-type transport system, involved in lipoprotein release, permease component; IMG reference gene:2512956640.
 
    0.964
RSP_3135
ppkA-related protein; IMG reference gene:2512956644.
 
  
 0.951
RSP_3129
IMG reference gene:2512956637; PFAM: Protein kinase domain.
  
  
 0.896
RSP_3131
ABC (antimicrobial peptide) transporter, ATPase subunit; IMG reference gene:2512956639; PFAM: ABC transporter.
  
    0.878
RSP_3130
Putative serine protease; IMG reference gene:2512956638; PFAM: FHA domain.
 
    0.846
RSP_3134
IMG reference gene:2512956643; PFAM: Protein kinase domain; truncated by 3 aa.
 
  
 0.779
RSP_0594
Putative choline sulfatase; IMG reference gene:2512955609; PFAM: Choline sulfatase enzyme C terminal; Sulfatase; TIGRFAM: choline-sulfatase.
  
   0.744
RSP_6164
Hypothetical protein; IMG reference gene:2512956642.
       0.719
RSP_1872
Glycosyl transferase, family 2; IMG reference gene:2512953782; PFAM: GSPII_E N-terminal domain; Glycosyl transferase family 2.
   
    0.614
RSP_3488
Hypothetical protein; IMG reference gene:2512956998; PFAM: Uncharacterized protein conserved in bacteria (DUF2094); TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; truncated by 6 aa.
 
    0.596
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.