STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3151ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; IMG reference gene:2512956660; PFAM: NMT1/THI5 like. (330 aa)    
Predicted Functional Partners:
RSP_3153
ABC nitrate/sulfonate/bicarbonate transporter family, inner membrane subunit; IMG reference gene:2512956662; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.992
RSP_3154
ABC nitrate/sulfonate/bicarbonate transporter family, ATPase subunit; IMG reference gene:2512956663; PFAM: ABC transporter; truncated by 18 aa.
 
 
 0.991
RSP_3152
ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; IMG reference gene:2512956661; PFAM: NMT1/THI5 like.
 
 
 
0.979
RSP_3143
NIPSNAP family protein; IMG reference gene:2512956652; PFAM: NIPSNAP.
 
     0.513
ttdB
Putative Tartrate dehydratase beta subunit; IMG reference gene:2512956654; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region.
  
    0.441
RSP_3148
IMG reference gene:2512956657; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit.
       0.441
RSP_3149
IMG reference gene:2512956658; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
       0.441
RSP_3166
ABC transporter, inner membrane subunit; IMG reference gene:2512956676; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 0.434
RSP_3167
ABC transporter, ATPase subunit; IMG reference gene:2512956677; PFAM: ABC transporter.
  
  
 0.430
RSP_0645
ABC transporter, ATPase subunit; IMG reference gene:2512955664; PFAM: ABC transporter.
  
  
 0.424
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.